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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914500.1_cds_XP_016464484.1_57519
CDS Infomation

[gene=LOC107787429] [db_xref=GeneID:107787429] [protein=phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like] [protein_id=XP_016464484.1] [location=join(13403..13549,14165..14287,14404..14496,15166..15222,15424..15479,15595..15687,17016..17106,17229..17266,17412..17450,18102..18178,18251..18335,18433..18529,18619..18715,19409..19480,19655..19721,19797..19922,20828..20882,20965..21015)] [gbkey=CDS]
Sequence

ATGGCGGAAGACGCTATACTCGAATTTCTTGAAAAGAACGAGGAGATTTCAGATTCTTTT
AAATTTGCTGAACAACATGGATTCCTCCACGAGGAGATTGTCAATGTTATCCGCAGCCTC
AATGGTTTTAGATTTGTTGATGCTCAGGATATTAGGAGAGAGAGATGGGTGCTTACTGAA
GAGGGGAAAACCTATGCTTCCGTAGGTTCTCCAGAATTTCAGCTTTTCTCAGCAGTACCA
CCAGAAGGAATTGCGCGGGAGGAGTTGCAGAAAAAGTTGGATCCTGCAGTTTATAAAATT
GGTTGCCAGCAAGCTATAAAGAACAAGTGGGTGGAGATGGCAAAGACTCAAGTTTCAAGG
AAGGTCCACCACGCTGATGATAAAGTTAAAGATTCACTCTTGAGGATACAAAATGGCGAG
GCTGTCAATCAGGAGGATATTGATGCTCTAAAGCGCCGAAAGCTAATAAGTCAGCAGGTT
TGGAAAGGAAACTCAGTGAGAAAAGGTCCTAACTATGCTCCTAAAAGGAAAAGAGCCGCA
ACTGATCTCACTCGTGAAAACCTACAGAGGGGTGACTGGAAGGAATTGGAATTTAAGGAG
TATAACTTCAGTGCAAAAGGTCAGCCAGTTGAAGGTGGCCATCTTCATCCATTGCTTAAG
GTTAGGCGGCAGATACAAATGATTTTTCTTAATATGGGGTTTGAGGAGATGCCAACAAAT
AACTATGTCGAAAGCAGTTTTTGGAACTTCGATGCACTCTTCCAGCCACAACAGCACCCT
GCCCGTGATTCCCATGATACATTCTTTTTGAAAGTCCCTTCCACTACAAAGATGCTGCCA
GAAGAGTATGTTGAGCGGGTAAAACAAGTTCATGAATCTGGTGGTTACCAGTCTAGGGGA
TATGGGTATGATTGGAAAAGAGAGGAAGCAAACAAGAATCTTTTGCGGACACACACTACT
GCTGTTTCGTCAAGAATGTTGTGTGCATTAGCTCAGAAGCCCTTTGCCCCCAAGAAATAC
TATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATCGGACACATCTTGCTGAATTT
CACCAGATAGAAGGCTTAATATGTGATCGTGGACTTACTCTTGGTGACCTGATTGGTGTT
CTTCATGACTTCTTTGCTCGTCTAGGAATGTCCAAGCTTCGGTTCAAACCTGCATATAAT
CCTTATACTGAGCCCAGCATGGAAATTTTCAGCTACCATGAAGGCTTAAAGAAATGGGTG
GAAGTTGGGAATTCTGGTATGTTTAGGCCTGAAATGCTGCTTCCTATGGGGCTGCCAGAA
GATGTTCGGGTTATTGCCTGGGGCCTTTCCCTTGAGAGGCCCACCATGATTCTCTACGGG
ATTGACAATATCAGAGATCTTTTTGGTCCTAAGGTGGATATAGGTCTCATCAAAAGAAAT
CCAATATGCCGGCTTGGGCTTTAG

Peptide Sequence

PEP ID

XP_016464484.1
PEP Infomation

PREDICTED: phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like [Nicotiana tabacum]
Sequence

MAEDAILEFLEKNEEISDSFKFAEQHGFLHEEIVNVIRSLNGFRFVDAQDIRRERWVLTE
EGKTYASVGSPEFQLFSAVPPEGIAREELQKKLDPAVYKIGCQQAIKNKWVEMAKTQVSR
KVHHADDKVKDSLLRIQNGEAVNQEDIDALKRRKLISQQVWKGNSVRKGPNYAPKRKRAA
TDLTRENLQRGDWKELEFKEYNFSAKGQPVEGGHLHPLLKVRRQIQMIFLNMGFEEMPTN
NYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTKMLPEEYVERVKQVHESGGYQSRG
YGYDWKREEANKNLLRTHTTAVSSRMLCALAQKPFAPKKYYSIDRVFRNEAVDRTHLAEF
HQIEGLICDRGLTLGDLIGVLHDFFARLGMSKLRFKPAYNPYTEPSMEIFSYHEGLKKWV
EVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGPKVDIGLIKRN
PICRLGL

Transcript Sequence

Gene sequence data has not been registered.